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Biotechnology Information non redundant protein sequence database nr
Non Redundant Protein Sequence Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/non-redundant+database/database+ncbi+non+redundant/pm42117702-34-14-24
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non redundant protein sequence database nr - by Bioz Stars, 2026-10
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Virus:

Article Title: Exploring the transcriptome of immature stages of Ornithodoros hermsi , the soft-tick vector of tick-borne relapsing fever
Article Snippet: The DNA coding sequences (CDS) with an open reading frame (ORF) of at least 100 nucleotides were extracted based on BLASTp results from several databases, including subsets of the non-redundant and transcriptome shotgun assembly from National Center for Biotechnology Information (NCBI) databases (chelicerata, Rickettsiales, and Borreliaceae), RefSeq invertebrate ( https://ftp.ncbi.nlm.nih.gov/refseq/release/invertebrate/ ), RefSeq protozoa ( https://ftp.ncbi.nlm.nih.gov/refseq/release/protozoa/ ), RefSeq mitochondrion ( https://ftp.ncbi.nlm.nih.gov/refseq/release/mitochondrion/ ), tick genomes , mouse genome, and virus-phage.

Article Title: A Novel Strain of Fusarium oxysporum Virus 1 Isolated from Fusarium oxysporum f. sp. niveum Strain X-GS16 Influences Phenotypes of F. oxysporum Strain HB-TS-YT-1 hyg .
Article Snippet: BLASTx search against the National Center for the Biotechnology Information (NCBI) non-redundant database showed that FoV1-FON had the highest identity (97.46%) with FoV1.

Article Title: Genetic characterization of a locus responsible for low pungency using EMS-induced mutants in Capsicum annuum L.
Article Snippet: We functionally annotated these five genes through BLASTp searches using the non-redundant (nr) database from the National Center for Biotechnology Information (NCBI) to predict gene function.

Article Title: Genome and pan-genome analysis of a new exopolysaccharide-producing bacterium Pyschrobacillus sp. isolated from iron ores deposit and insights into iron uptake
Article Snippet: Then, the predicted gene sequences were translated and searched in the National Center for Biotechnology Information (NCBI) non-redundant database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database with a cutoff value of 0.01 ( ).

Article Title: Chemical-defensome and whole-transcriptome expression of the silverside fish Basilichthys microlepidotus in response to chronic pollution in the Maipo River basin, Central Chile.
Article Snippet: Pollution is a major global concern affecting biodiversity, particularly of freshwater species.. Populations have developed mechanisms to deal with pollution, such as the chemical defensome, which is a set of genes involved in maintaining internal stability.. Pollution significantly affects the Maipo River basin in Chile.

Article Title: The high-quality genome of Cryptotaenia japonica and comparative genomics analysis reveals anthocyanin biosynthesis in Apiaceae.
Article Snippet: Hui Liu, Jia-Qi Zhang, Rong-Rong Zhang, Qin-Zheng Zhao, Li-Yao Su , Zhi-Sheng Xu , Zong-Ming (Max) Cheng , Guo-Fei Tan and Ai-Sheng Xiong State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China, and Institute of Horticulture, Guizhou Academy of Agricultural Sciences, Guiyang, China

Article Title: Comparative Metagenomic Analysis Reveals Rhizosphere Microbiome Assembly and Functional Adaptation Changes Caused by Clubroot Disease in Chinese Cabbage
Article Snippet: Then, the sequences were extracted from the non-redundant database of National Center for Biotechnology Information (NCBI, version: 2022.12).

Article Title: Characterization of a novel cold-adapted GH1 β-glucosidase from Psychrobacillus glaciei and its application in the hydrolysis of soybean isoflavone glycosides
Article Snippet: The sequence identity and coding gene were predicted through BLAST analysis against the National Center for Biotechnology Information (NCBI) non-redundant database ( https://www.ncbi.nlm.nih.gov/ ; accessed on 6 June 2023).

Coagulation:

Article Title: Exploring the transcriptome of immature stages of Ornithodoros hermsi , the soft-tick vector of tick-borne relapsing fever
Article Snippet: The DNA coding sequences (CDS) with an open reading frame (ORF) of at least 100 nucleotides were extracted based on BLASTp results from several databases, including subsets of the non-redundant and transcriptome shotgun assembly from National Center for Biotechnology Information (NCBI) databases (chelicerata, Rickettsiales, and Borreliaceae), RefSeq invertebrate ( https://ftp.ncbi.nlm.nih.gov/refseq/release/invertebrate/ ), RefSeq protozoa ( https://ftp.ncbi.nlm.nih.gov/refseq/release/protozoa/ ), RefSeq mitochondrion ( https://ftp.ncbi.nlm.nih.gov/refseq/release/mitochondrion/ ), tick genomes , mouse genome, and virus-phage.

Article Title: A Novel Strain of Fusarium oxysporum Virus 1 Isolated from Fusarium oxysporum f. sp. niveum Strain X-GS16 Influences Phenotypes of F. oxysporum Strain HB-TS-YT-1 hyg .
Article Snippet: BLASTx search against the National Center for the Biotechnology Information (NCBI) non-redundant database showed that FoV1-FON had the highest identity (97.46%) with FoV1.

Article Title: Genetic characterization of a locus responsible for low pungency using EMS-induced mutants in Capsicum annuum L.
Article Snippet: We functionally annotated these five genes through BLASTp searches using the non-redundant (nr) database from the National Center for Biotechnology Information (NCBI) to predict gene function.

Article Title: Genome and pan-genome analysis of a new exopolysaccharide-producing bacterium Pyschrobacillus sp. isolated from iron ores deposit and insights into iron uptake
Article Snippet: Then, the predicted gene sequences were translated and searched in the National Center for Biotechnology Information (NCBI) non-redundant database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database with a cutoff value of 0.01 ( ).

Article Title: Chemical-defensome and whole-transcriptome expression of the silverside fish Basilichthys microlepidotus in response to chronic pollution in the Maipo River basin, Central Chile.
Article Snippet: Pollution is a major global concern affecting biodiversity, particularly of freshwater species.. Populations have developed mechanisms to deal with pollution, such as the chemical defensome, which is a set of genes involved in maintaining internal stability.. Pollution significantly affects the Maipo River basin in Chile.

Article Title: The high-quality genome of Cryptotaenia japonica and comparative genomics analysis reveals anthocyanin biosynthesis in Apiaceae.
Article Snippet: Hui Liu, Jia-Qi Zhang, Rong-Rong Zhang, Qin-Zheng Zhao, Li-Yao Su , Zhi-Sheng Xu , Zong-Ming (Max) Cheng , Guo-Fei Tan and Ai-Sheng Xiong State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China, and Institute of Horticulture, Guizhou Academy of Agricultural Sciences, Guiyang, China

Article Title: Comparative Metagenomic Analysis Reveals Rhizosphere Microbiome Assembly and Functional Adaptation Changes Caused by Clubroot Disease in Chinese Cabbage
Article Snippet: Then, the sequences were extracted from the non-redundant database of National Center for Biotechnology Information (NCBI, version: 2022.12).

Article Title: Characterization of a novel cold-adapted GH1 β-glucosidase from Psychrobacillus glaciei and its application in the hydrolysis of soybean isoflavone glycosides
Article Snippet: The sequence identity and coding gene were predicted through BLAST analysis against the National Center for Biotechnology Information (NCBI) non-redundant database ( https://www.ncbi.nlm.nih.gov/ ; accessed on 6 June 2023).

Sequencing:

Article Title: Exploring the transcriptome of immature stages of Ornithodoros hermsi , the soft-tick vector of tick-borne relapsing fever
Article Snippet: The DNA coding sequences (CDS) with an open reading frame (ORF) of at least 100 nucleotides were extracted based on BLASTp results from several databases, including subsets of the non-redundant and transcriptome shotgun assembly from National Center for Biotechnology Information (NCBI) databases (chelicerata, Rickettsiales, and Borreliaceae), RefSeq invertebrate ( https://ftp.ncbi.nlm.nih.gov/refseq/release/invertebrate/ ), RefSeq protozoa ( https://ftp.ncbi.nlm.nih.gov/refseq/release/protozoa/ ), RefSeq mitochondrion ( https://ftp.ncbi.nlm.nih.gov/refseq/release/mitochondrion/ ), tick genomes , mouse genome, and virus-phage.

Article Title: A Novel Strain of Fusarium oxysporum Virus 1 Isolated from Fusarium oxysporum f. sp. niveum Strain X-GS16 Influences Phenotypes of F. oxysporum Strain HB-TS-YT-1 hyg .
Article Snippet: BLASTx search against the National Center for the Biotechnology Information (NCBI) non-redundant database showed that FoV1-FON had the highest identity (97.46%) with FoV1.

Article Title: Genetic characterization of a locus responsible for low pungency using EMS-induced mutants in Capsicum annuum L.
Article Snippet: We functionally annotated these five genes through BLASTp searches using the non-redundant (nr) database from the National Center for Biotechnology Information (NCBI) to predict gene function.

Article Title: Genome and pan-genome analysis of a new exopolysaccharide-producing bacterium Pyschrobacillus sp. isolated from iron ores deposit and insights into iron uptake
Article Snippet: Then, the predicted gene sequences were translated and searched in the National Center for Biotechnology Information (NCBI) non-redundant database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database with a cutoff value of 0.01 ( ).

Article Title: Chemical-defensome and whole-transcriptome expression of the silverside fish Basilichthys microlepidotus in response to chronic pollution in the Maipo River basin, Central Chile.
Article Snippet: Pollution is a major global concern affecting biodiversity, particularly of freshwater species.. Populations have developed mechanisms to deal with pollution, such as the chemical defensome, which is a set of genes involved in maintaining internal stability.. Pollution significantly affects the Maipo River basin in Chile.

Article Title: The high-quality genome of Cryptotaenia japonica and comparative genomics analysis reveals anthocyanin biosynthesis in Apiaceae.
Article Snippet: Hui Liu, Jia-Qi Zhang, Rong-Rong Zhang, Qin-Zheng Zhao, Li-Yao Su , Zhi-Sheng Xu , Zong-Ming (Max) Cheng , Guo-Fei Tan and Ai-Sheng Xiong State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Germplasm Enhancement of Horticultural Crops in East China, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China, and Institute of Horticulture, Guizhou Academy of Agricultural Sciences, Guiyang, China

Article Title: Comparative Metagenomic Analysis Reveals Rhizosphere Microbiome Assembly and Functional Adaptation Changes Caused by Clubroot Disease in Chinese Cabbage
Article Snippet: Then, the sequences were extracted from the non-redundant database of National Center for Biotechnology Information (NCBI, version: 2022.12).

Article Title: Characterization of a novel cold-adapted GH1 β-glucosidase from Psychrobacillus glaciei and its application in the hydrolysis of soybean isoflavone glycosides
Article Snippet: The sequence identity and coding gene were predicted through BLAST analysis against the National Center for Biotechnology Information (NCBI) non-redundant database ( https://www.ncbi.nlm.nih.gov/ ; accessed on 6 June 2023).



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